But the tires are changing for everyone... Lotus would still be better than everyone else on whatever new compounds are introduced. 
IMO that's not true. In fact, I think Lotus stand to be big losers here. From what I've heard from Pirelli it seems they will change the structure of the tire and will be releasing to the teams the new data for their CFD and WT testing. The tire deformation etc will indeed change. That's pretty much fact. Below is my interpretations so can and should of course be read with a grain of salt

My opinion as to why the Lotus is so good on tires is because they have built their chassis on a "soft suspension" philosophy. Ferrari have a "variable" suspension philosophy. Red Bull and Merc have a rigid philosophy. Probably oversimplifying things here but Rigid=best aero results.Red Bull rely on a very rigid setup with a well defined rake and have done for many years now. Lotus and Ferrari were heavily influenced by the tire data that Pirelli gave the teams last year to prepare their 2013 chassis for.
More supposition on my behalf ..... another contributing factor to the tires failing so badly for
some teams this year is because of the the added weight and rubber (I know its not really rubber on these tires) applied to the 2013 tires. From memory the 4 tires are 2Kg heavier this year (mostly on the rears) - that's quite a lot of added rubber. Additionally teams have improved performance this year. More performance means more energy being pushed through the tire. More energy equals more heat. If you keep the car rigid, then nearly all that extra energy goes into the tires and materializes as heat. Too much heat and the tire grains and fails - fast. That is why Merc and RB are so good in Q - they heat up their tires very fast. Ferrari have shown their ability on the practice sessions to match Merc and RB in pace, yet when they roll out the F138 for Q it seems to be off the pace. I believe they are softening the suspension, forgoing some Q speed but gaining race pace through improved tire management. Remember, a softer suspension means that not all the downforce aero energy is ending up in the tire - so the tire doesn't overheat. If you recall, the Lotus, in Barcelona, was so good at tire temp management that it was able to run on the option tire most stints and still get the life needed.
I'm against the changes to the tires as I see it as simply helping teams that didn't do a good job of designing this year's car as other teams did. They should keep the existing rubber, Pirelli can go for harder compounds each race and not put gaps between prime and option tire. But they should keep this years rubber as is because that is the fair thing to do.
Wearing my Tifosi red-tinted glasses .... I think the big loser here will be Lotus as a big chunk of their advantage will be wiped out in one hit. But I don't think this is going to hurt Ferrari much at all. In fact, it may have the reverse effect. Ferrari will not have to compromise their Q speed and, as I believe their aero package is very good (see my post in the Ferrari section on the Barcelona practice data), it may in fact make the F138 gain even more. I guess that remains to be seen....